W. Zhang, E. Zeng, D. Liu, S. Jones, S. Emrich, Mapping genomic features to functional traits through microbial whole genome sequences, to appear in the International Journal of Bioinformatics Research and Applications.
K. Mathee, G. Narasimhan, C. Valdes, X. Qiu, J. Matewish, M. Koehrsen, A. Rokas, C. Yandava, R. Engels, E. Zeng, R. Olavarietta, M. Doud, R. Smith, P. Montgomery, J. White, P. Godfrey, C. Kodira, B. Birren, J. Galagan, S. Lory,
Dynamics of Pseudomonas aeruginosa genome evolution,
Proceedings of the National Academy of Sciences (PNAS). 2008; 105(8):3100-05.
J. Yue, E. Zeng, J. Xie, Y. Li, L. Liang, H. Wang,
Reliable detection of Rifampin-resistance of Mycobacterium tuberculosis strains by using a specialized oligonucleotide microarray (in Chinese), Chinese Journal of Biochemistry and Molecular Biology. 2004 ;20(2):264-9.
D. Wang, M. Li, E. Zeng, W. Zhang, X. Wu, Cloning of secondary lymphoid-tissue chemokine (SLC) and its expression in prokaryotic system (in Chinese), Chinese Journal of Biotechnology. 2001; 17(4):392-395.
Y. Zhang, E. Zeng, T. Li, G. Narasimhan, Weighted consensus clustering for identifying functional modules in protein-protein interaction networks, Proceedings of ICMLA'09: the International Conference on Machine Learning and Applications, Miami, December, 2009.
C. Yang*, E. Zeng*, K. Mathee, G. Narasimhan, Querying a database of regulatory elements, Proceedings of ICBA'04: the International Conference on Bioinformatics and its Applications, Fort Lauderdale, Florida, December 2004.
*contributed equally. [pdf]
E. Zeng, W. Zhang, D. Liu, S. Jones, S. Emrich, Gene content based functional trait analysis through comparative microbial whole genome sequences, ISCB 10th Annual Rocky Mountain Bioinformatics Conference (Rocky 2012), Aspen/Snowmass, CO, December 6-8, 2012.
J. Livermore, J. Lennon, S. Emrich, W. Zhang, E. Zeng, D. Liu, S. Jones, Genomic predictors of the bacterial soil moisture niche, The 4th Annual Argonne Soil Metagenomics, Chicago, IL, October 3–5, 2012.
V. Kamath, K. McAbee, D. L. Donahue, J. Tan, E. Zeng, E. E. McKee, Chronic treatment with Azidothymidine (AZT) alters cytoskeletal proteins responsible for cardiac function, Twenty-Fifth International Conference on Antiviral Research (ICAR), Sapporo, Japan, April 16 – 19, 2012.
M. Champion, E. Zeng, Proteogenomic validation of small and orphan polypeptides from pathogenic Mycobacteria using non-biased translation, 59th ASMS Conference on Mass Spectrometry and Allied Topics, Colorado Convention Center, CO, June 2011.
M. Champion, E. Zeng, Proteogenomic methods for small and orphan polypeptide discovery in pathogenic Mycobacteria using non-biased translation, Great Lakes Bioinformatics Conference (GLBIO) 2011, Ohio University, Athens, OH, May 2011.
P. McHenry, S. Peddibhotla, M. Hwang, P. Chang, J. Sears, K. Park, C. Mohar, E. Zeng, J. Rosen, and T. Vargo-Gogola1, P190B RhoGAP regulates mitotic spindle function in breast cancer cells and spindle orientation in primary mammary epithelial cells, Cancer Research Day, Indiana University Melvin and Bren Simon Cancer Center, 2011.
E. Zeng, S. Chaterjee, K. Mathee, G. Narasimhan, Iterative enhancement of motifs using comparative genomics data, Fourth Annual RECOMB Satellite on Regulatory Genomics, Boston, October 2007.
G. Narasimhan, K. Mathee, C. Valdes, E. Zeng, R. Olavarietta, M. Doud, P. Godfrey, M. Koehrsen, A. Rokas, C. Yandava, R. Engels, C. Kodira, Bruce Birren, J. Galagan, S. Lory, Comparative genomics of the pathogen Pseudomonas aeruginosa, Fifth Annual RECOMB Satellite on Comparative Genomics, San Diego, September 2007.
P. Godfrey, K. Mathee, G. Narasimhan, C. Valdes, E. Zeng, R. Olavarietta, M. Doud, C. Yandava, M. Koehrsen, R. Engels, P.
Montgomery, J. White, C. Kodira, S. Lory , B. Birren, J. Galagan, Comparative genomics of P. aeruginosa, CSHL workshop on Genome
Informatics, Cold Spring Harbor Laboratory, November 2007.
C. Yang, E. Zeng, G. Narasimhan,
A Knowledge-driven method to evaluate multi-source clustering, The ISMB BioLINK Special Interest Group, Detroit, June 2005.
G. Zheng, E. Zeng, E.O. George, G. Narasimhan,
Integrating information from different microarray data sets, In
Silico Conference, Atlanta, November 2003.
E. Zeng, J. Liu, Z. Lin, Number: 00119541.7 (Chinese), 2001.