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Dan Combest
B.S. Chemistry at Berea College (2002)
B.S. Chemical Engineering at Washington University in
St. Louis (2004)
Participant in Notre Dame's REU program (2002)
Participant in an REU program with Dr. Gero Decher in Strasbourg (2003)
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- Statistical Mechanics of Quantum Cellular Automata
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Pat Conforti
B.S. (Chemistry) from the University of Notre Dame (2003)
Currently a graduate student in Chemistry at the
Pennsylvania State University
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- Dynamics of alloying and de-alloying in bimetallic
nanoparticles
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Kyle Daily
B.S. (Chemistry & Physics) from
Northwest Missouri State University (2003)
M.S. (Chemistry) from the University of Notre
Dame (2005)
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- Molecular-Scale Contact Potentials
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Peter DeCarlo
B.S. (Biochemistry) University of Notre Dame (2001)
Currently a graduate student in the Program in
Atmospheric and Oceanic Science at the University of
Colorado
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- Percolation Theory
- Interdiffusion of isotopic mixtures
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Chris Fennell
B.S. in Chemistry (with minors in Mathematics and Art) from
Drake University (2001)
Ph.D. in Chemistry from the University of
Notre Dame (2006)
Currently a Post-doctoral Research Scientist
in Ken Dill's lab at UCSF
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- Single-point models for water
- Novel polymorphs of ice
- Propagators for Orientational degrees of freedom in
molecular dynamics
- Methods for pairwise electrostatics
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Patrick Holvey
B.S. in Chemistry from the University of Notre Dame (2010)
Currently in the PhD program in Materials Science and Engineering at The Johns Hopkins University
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- Computational models for metal-water
interactions
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Chunlei Li
B.S., Life Sciences, Peking University (2007)
M.S. in Biochemistry from the University of Notre Dame (2010)
Currently in the PhD program in Applied and Computational Mathematics and Statistics at Notre Dame.
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- Developing collective coordinate molecular orientational
restraints
- Computer modeling of the
binding of type V insect
anti-freeze proteins (AFPs) to ice
surfaces
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Teng Lin
B.S. USTC (2001)
Ph.D. in Chemistry from the University of
Notre Dame (2006)
Currently a Scientific Programmer at
Schrodinger, Inc.
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- Reduced models for lipid-water
interactions
- Methods for performing Langevin
dynamics on rigid molecular substructures
- Development of OOPSE molecular dynamics simulation engine
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Matt
Meineke
B.S. (Chemistry and Physics) Western Kentucky University
(1999)
Ph.D. (Chemistry) University of Notre Dame (2004)
Currently a Medical Physicist at Memorial Hospital in South Bend, IN
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- Coarse-Grained Models for Biological Membranes
- Random Sequential Adsorption Models for Self-assembled
Monolayers
- Development of BASS molecular dynamics simulation language
- Development of OOPSE molecular dynamics simulation engine
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Christie Puglis
B.S. (Biochemistry) Unviersity of Notre Dame
(2008)
Currently at the Southern College of Optometry
in Memphis, TN
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- Computer modeling of the
binding of type V insect
anti-freeze proteins (AFPs) to ice
surfaces
- Dynamics of threonine-bound structural
water molecules in type V insect AFP
solution structures.
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Dr. Jayashree
Saha
Ph.D. (Physics) University of Calcutta (1996)
Post-doctoral research scientist at Notre Dame
(1999-2001)
Currently a Lecturer in Physics at Visva-Bharati,
Santiniketan, West Bengal, India
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- Molecular-Scale Models for Biological Membranes
- Phase transitions in model dipolar liquid crystals
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Megan Sprague
B.S. (Mathematics) from the University of Notre Dame
(2003)
Currently a graduate student in Chemistry at the
University of Wisconsin, Madison
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- Elastic properties of bi-metallic nanoparticles
- Using Delaunay Triangulation and Voronoi Polyhedra to
study vacancy migration in molecular dynamics simulations
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Jenna Stevens
B.S. (Chemistry) from the University of Notre Dame (2007)
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- Ion transport in supercritical water
- Simulations of vibrational relaxation in solution
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Xiuquan Sun
B.S. (Physical Chemistry) Jilin University (1999)
M.S. (Physical Chemistry) Jilin University
(2002)
Ph.D. (Chemistry) University of Notre Dame
(2008)
Currently a post-doctoral research scientist
in the Dang group at Pacific Northwest
National Laboratory.
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- Dipolar lattice models for ripple phase formation in lipids
- Molecular-scale models for lipid phase transitions
- Langevin dynamics methods for rigid molecular substructures
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Charles F. Vardeman II
B.S. (Chemistry) University of Notre Dame
(2000)
Ph.D. (Chemistry) University of Notre Dame
(2008)
Currently a staff member at the Center for
Research Computing at the University of Notre Dame.
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- Laser-induced glass formation in bimetallic
nanoparticles
- Dynamics of alloying and de-alloying in bimetallic
nanoparticles
- Anomalous transport in metallic glasses
- Parallel Molecular Dynamics methods development
- Vacancy Migration
- Development of OpenMD
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Changsen Xu
B.S. (Chemical Physics) USTC (1995)
M.S. (Chemistry) University of Notre Dame (2001)
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- Random Matrix Theory
- Vibrational spectra of liquids, supercooled liquids
and glassy materials
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Yang Zheng
B.S. (Chemistry) North East Normal University (1997)
M.S. (Computer Science) Kansas State University
(2003)
M.S. (Chemistry) University of Notre Dame (2005)
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- Size-dependent Cutoff Methods for Molecular
Dynamics
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